The characterization of protein binding sites is a major challenge in computational biology. Proteins interact with a wide variety of molecules and understanding of such complex interactions is essential to gain deeper knowledge of protein function. We developed KVFinder, a highly versatile and easy-to-use tool for cavity prospection and spatial characterization. KVFinder is a geometrical-based method that has an innovative customization of the search space.
KVFinder's source code will be freely available to the scientific community after the manuscript publication.
KVFinder Basic Tutorial
KVFinder Advanced Tutorial
KVFinder Segmentation Tutorial
KVFinder is available for Linux and Windows.